Variant NM_000492.4:c.1679G>C


Variant details:
Name NM_000492.4:c.1679G>C
Protein name NP_000483.3:p.(Arg560Thr)
Genomic name (hg19)     chr7:g.117227887G>C    UCSC    
Genomic name (hg38) chr7:g.117587833G>C    UCSC
#Exon/intron exon 12
Legacy Name R560T
Class disease-causing
Subclass CF-causing
WT sequence CAACGAGCAAGAATTTCTTTAGCAA G GTGAATAACTAATTATTGGTCTAGC
Mutant sequence CAACGAGCAAGAATTTCTTTAGCAA C GTGAATAACTAATTATTGGTCTAGC

Other databases:
dbSNP
rs80055610



Pathogenicity predictors:



Response to modulators:


Modulator FDA approval EMA approval in vitro / ex vivo data clinical data
VNZ-TEZ-DIVA yesnoyesno

clinical and functional data presented above are provided by Vertex

No patient found in CFTR-NGS catalogue

No patient found in CFTR-France




Color code:   non disease-causing <   likely benign <   VUS <   likely pathogenic <   disease-causing

            CFTR variants are clustered into five groups (click here for more details about the classification of variants):
  • CF-causing: when in trans with another CF-causing mutation, will result in CF.
  • CFTR-RD causing: when in trans with a CF-causing mutation, will result in CFTR-related disorders (CFTR-RD) such as chronic pancreatitis, bronchiectasis, CRS-NP (chronic rhinosinusitis with or without nasal polyposis) or CBAVD (congenital absence of vas deferens), according to Bombieri C et al., 2011.
  • Varying clinical consequence: when in trans with another CF-causing mutation, can either result in CF or in a CFTR-RD.
  • Non disease-causing: when in trans with a CF-causing mutation, will not cause CF, nor CFTR-RD.
  • VUS (Variant of unknown clinical significance): unclassified because of insufficient data.



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