catalog




CFTR-NGS variants catalogue


Variant hg19:chr7:117171398G/GT


CFTR-NGS Variant details:
Name NM_000492.4:c.489+240dupT
Protein name NP_000483.3:p.(?)
Genomic name (hg19) chr7:g.117171408dup    UCSC    
#Exon/intron intron 4
Type in CFTR-NGS catalogue repeat
Class in CFTR-France not reported
WT sequence CTGCCTCTGTTGTAGTTTTTTTTTT - CTCCTAATCATGTTATCATTTTTTT
Mutant sequence CTGCCTCTGTTGTAGTTTTTTTTTT T CTCCTAATCATGTTATCATTTTTTT


Additional information:
MAF (GnomAD) 4.80e-04
Splicing prediction (SpliceAI) AG: 0.00 (0)
AL: 0.00 (1)
DG: 0.00 (0)
DL: 0.00 (1)




External sources:

Not found
Not found		dbSNP
no rs
Not found

Variant validation:
Sanger
(present/not present/not verified)
 Minigene
(effect/no effect/not performed)
not verifiednot performed



No patient found in CFTR-France


1 individual (out of 136) carrying this variant is reported in CFTR-NGS catalogue:

TOTAL NUMBER OF INDIVIDUALS 1
Asymptomatic 1



Details of NGS patients:
ID Phenotype Laboratory Experiment Variant status Variant filter Quality score Depth of coverage
MUCO07300AsymptomaticMontpellier100714_varilhheterozygous PASS 585 55





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