catalog




CFTR-NGS variants catalogue



CFTR-NGS Variant details:
Name NM_000492.4:c.1684G>C
Protein name NP_000483.3:p.(Val562Leu)
Genomic name (hg19) chr7:g.117230411G>C    UCSC    gnomAD
#Exon/intron exon 13
Legacy Name V562L
Type in CFTR-NGS catalogue -
Class in CFTR-France VUS
Subclass VUS2
WT sequence TAATTTCCATTTTCTTTTTAGAGCA G TATACAAAGATGCTGATTTGTATTT
Mutant sequence TAATTTCCATTTTCTTTTTAGAGCA C TATACAAAGATGCTGATTTGTATTT


Additional information:
MAF (GnomAD) -
Splicing prediction (SpliceAI) -

External sources:

Not found
dbSNP
no rs

Variant validation:
Sanger
(present/not present/not verified)
Minigene
(effect/no effect/not performed)
presentnot performed


Pathogenicity predictions:
AGVGD MAPP SIFT PPH2
C0 0.1955 0.41 0.054
VUS1 VUS1 VUS1 VUS1
Color code:   non disease-causing <   VUS1 <   VUS2 <   VUS3 <   VUS4 <   VUS5 <   disease-causing


No patient found in CFTR-NGS

3 individuals reported in CFTR-France







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