catalog




CFTR-NGS variants catalogue


Variant hg19:chr7:117241564GT/G


CFTR-NGS Variant details:
Name NM_000492.4:c.2620-1307delT
Protein name NP_000483.3:p.(?)
Genomic name (hg19) chr7:g.117241573del    UCSC    
#Exon/intron intron 15
Type in CFTR-NGS catalogue repeat
Class in CFTR-France not reported
WT sequence AAGTGTTCCCCATAAGGTTTTTTTT T ATATAAACTTAAGTACTGTTAAATA
Mutant sequence AAGTGTTCCCCATAAGGTTTTTTTT - ATATAAACTTAAGTACTGTTAAATA


Additional information:
MAF (GnomAD) 7.04e-06
Splicing prediction (SpliceAI) AG: 0.00 (-13)
AL: 0.00 (-42)
DG: 0.00 (-13)
DL: 0.00 (50)




External sources:

Not found
Not found		dbSNP
no rs
Not found

Variant validation:
Sanger
(present/not present/not verified)
 Minigene
(effect/no effect/not performed)
not verifiednot performed



No patient found in CFTR-France


1 individual (out of 136) carrying this variant is reported in CFTR-NGS catalogue:

TOTAL NUMBER OF INDIVIDUALS 1
CFTR-RD1
  • CFTR-RD  1



Details of NGS patients:
ID Phenotype Laboratory Experiment Variant status Variant filter Quality score Depth of coverage
3641CFTR-RDMontpellier40216_varilhheterozygous PASS 1673 159





Go to CFTRare
VLMCHUUM