catalog




CFTR-NGS variants catalogue


Variant hg19:chr7:117239217C/T


CFTR-NGS Variant details:
Name NM_000492.4:c.2620-3663C>T
Protein name NP_000483.3:p.(?)
Genomic name (hg19) chr7:g.117239217C>T    UCSC    gnomAD
#Exon/intron intron 15
Type in CFTR-NGS catalogue -
Class in CFTR-France not reported
WT sequence ATGTCTGCCAGTCATGCCAAATGAC C AACATGAATGTGAATAAAACTCAGT
Mutant sequence ATGTCTGCCAGTCATGCCAAATGAC T AACATGAATGTGAATAAAACTCAGT


Additional information:
MAF (GnomAD) -
Splicing prediction (SpliceAI) AG: 0.00 (25)
AL: 0.00 (-14)
DG: 0.00 (-6)
DL: 0.00 (9)




External sources:

Not found
Not found		dbSNP
no rs
Not found

Variant validation:
Sanger
(present/not present/not verified)
 Minigene
(effect/no effect/not performed)
not verifiednot performed



No patient found in CFTR-France


1 individual (out of 136) carrying this variant is reported in CFTR-NGS catalogue:

TOTAL NUMBER OF INDIVIDUALS 1
CF 1



Details of NGS patients:
ID Phenotype Laboratory Experiment Variant status Variant filter Quality score Depth of coverage
9877CFMontpellier160218_varilhheterozygous PASS 5708 441





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