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CFTR-NGS variants catalogue
Variant hg19:chr7:117250765A/T
| Name | NM_000492.4:c.3139+42A>T |
| Protein name | NP_000483.3:p.(=) |
| Genomic name (hg19) | chr7:g.117250765A>T UCSC gnomAD |
| #Exon/intron | intron 19 |
| Legacy Name | 3271+42A/T |
| Type in CFTR-NGS catalogue | - |
| Class in CFTR-France | non disease-causing |
| WT sequence | GCGATACTCATCTTGTAAAAAAGCT A TAAGAGCTATTTGAGATTCTTTATT |
| Mutant sequence | GCGATACTCATCTTGTAAAAAAGCT T TAAGAGCTATTTGAGATTCTTTATT |
| MAF (GnomAD) | 3.58e-02 |
| Splicing prediction (SpliceAI) | AG: 0.00 (-28) AL: 0.00 (-32) DG: 0.00 (-28) DL: 0.00 (-3) |
 |  Not found | dbSNP no rs |  Not found |  |
| Sanger (present/not present/not verified) |
Minigene (effect/no effect/not performed) |
| present | not performed |
12 individuals carrying this variant are reported in CFTR-France |
| TOTAL NUMBER OF INDIVIDUALS | 1 |
|---|---|
| Suspicion of CF | 1 |
| ID | Phenotype | Laboratory | Experiment | Variant status | Variant filter | Quality score | Depth of coverage |
|---|---|---|---|---|---|---|---|
| m4959 | Suspicion of CF | Montpellier | 151220_Altieri | heterozygous | PASS | 3451 | 261 |
