|
CFTR-NGS variants catalogue
Variant hg19:chr7:117276940T/C
| Name | NM_000492.4:c.3718-5552T>C |
| Protein name | NP_000483.3:p.(?) |
| Genomic name (hg19) | chr7:g.117276940T>C UCSC gnomAD |
| #Exon/intron | intron 22 |
| Type in CFTR-NGS catalogue | - |
| Class in CFTR-France | not reported |
| WT sequence | AGGCTGGAGTGCAGTGGTGTGATCT T GGCTCACTGCAACCTCTGCCTCCTG |
| Mutant sequence | AGGCTGGAGTGCAGTGGTGTGATCT C GGCTCACTGCAACCTCTGCCTCCTG |
| MAF (GnomAD) | - |
| Splicing prediction (SpliceAI) | AG: 0.00 (-45) AL: 0.00 (10) DG: 0.00 (32) DL: 0.00 (-45) |
 Not found |  Not found | dbSNP no rs |  Not found |  |
| Sanger (present/not present/not verified) |
Minigene (effect/no effect/not performed) |
| not verified | not performed |
No patient found in CFTR-France |
| TOTAL NUMBER OF INDIVIDUALS | 1 |
|---|---|
| Suspicion of CF | 1 |
| ID | Phenotype | Laboratory | Experiment | Variant status | Variant filter | Quality score | Depth of coverage |
|---|---|---|---|---|---|---|---|
| m1552 | Suspicion of CF | Montpellier | 230414_varilh | heterozygous | PASS | 195 | 97 |
