|
CFTR-NGS variants catalogue
Variant hg19:chr7:117289568TATA/T
| Name | NM_000492.4:c.3874-3327_3874-3325delATA |
| Protein name | NP_000483.3:p.(?) |
| Genomic name (hg19) | chr7:g.117289569_117289571del UCSC |
| #Exon/intron | intron 23 |
| Type in CFTR-NGS catalogue | microsatellite |
| Class in CFTR-France | not reported |
| WT sequence | TGTGTGTGTATATATATATATATAT ATA TATTTTTTTTTTCCTGAGCCAAAAC |
| Mutant sequence | TGTGTGTGTATATATATATATATAT --- TATTTTTTTTTTCCTGAGCCAAAAC |
| MAF (GnomAD) | 8.95e-04 |
| Splicing prediction (SpliceAI) | AG: 0.00 (-28) AL: 0.00 (-30) DG: 0.00 (-28) DL: 0.00 (39) |
 Not found |  Not found | dbSNP rs1374326002 |  Not found |  |
| Sanger (present/not present/not verified) |
Minigene (effect/no effect/not performed) |
| not verified | not performed |
No patient found in CFTR-France |
| TOTAL NUMBER OF INDIVIDUALS | 1 |
|---|---|
| Suspicion of CF | 1 |
| ID | Phenotype | Laboratory | Experiment | Variant status | Variant filter | Quality score | Depth of coverage |
|---|---|---|---|---|---|---|---|
| m9196 | Suspicion of CF | Montpellier | 150419_Altieri | heterozygous | PASS | 322 | 39 |
