catalog




CFTR-NGS variants catalogue


Variant hg19:chr7:117289362G/C


CFTR-NGS Variant details:
Name NM_000492.4:c.3874-3534G>A
Protein name NP_000483.3:p.(?)
Genomic name (hg19) chr7:g.117289362G>A    UCSC    gnomAD
#Exon/intron intron 23
Type in CFTR-NGS catalogue -
Class in CFTR-France not reported
WT sequence TGTGTGTGTGTGTGTGTGTGTATAT G TGTGTGTGTATATATATATGGCAGT
Mutant sequence TGTGTGTGTGTGTGTGTGTGTATAT A TGTGTGTGTATATATATATGGCAGT


Additional information:
MAF (GnomAD) -
Splicing prediction (SpliceAI) AG: 0.00 (-25)
AL: 0.00 (25)
DG: 0.00 (3)
DL: 0.00 (-1)




External sources:

Not found
Not found		dbSNP
no rs
Not found

Variant validation:
Sanger
(present/not present/not verified)
 Minigene
(effect/no effect/not performed)
not verifiednot performed



No patient found in CFTR-France


1 individual (out of 136) carrying this variant is reported in CFTR-NGS catalogue:

TOTAL NUMBER OF INDIVIDUALS 1
Asymptomatic 1



Details of NGS patients:
ID Phenotype Laboratory Experiment Variant status Variant filter Quality score Depth of coverage
m2762AsymptomaticMontpellier230414_varilhheterozygous alleleBias 918 0





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