catalog




CFTR-NGS variants catalogue


Variant hg19:chr7:117300720A/ATGTG


CFTR-NGS Variant details:
Name NM_000492.4:c.3964-4002_3964-3999dupGTGT
Protein name NP_000483.3:p.(?)
Genomic name (hg19) chr7:g.117300740_117300743dup    UCSC    
#Exon/intron intron 24
Type in CFTR-NGS catalogue microsatellite
Class in CFTR-France not reported
WT sequence TATGTGTGTGTGTGTGTGTGTGTGT ---- ATATACACACACATATATATATACA
Mutant sequence TATGTGTGTGTGTGTGTGTGTGTGT GTGT ATATACACACACATATATATATACA


Additional information:
MAF (GnomAD) 3.75e-03
Splicing prediction (SpliceAI) -




External sources:

Not found
Not found		dbSNP
no rs
Not found

Variant validation:
Sanger
(present/not present/not verified)
 Minigene
(effect/no effect/not performed)
not verifiednot performed



No patient found in CFTR-France


1 individual (out of 136) carrying this variant is reported in CFTR-NGS catalogue:

TOTAL NUMBER OF INDIVIDUALS 1
CF 1



Details of NGS patients:
ID Phenotype Laboratory Experiment Variant status Variant filter Quality score Depth of coverage
P2BCFMontpellier230414_varilhheterozygous PASS 734 153





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