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CFTR-NGS variants catalogue
Variant hg19:chr7:117171259A/G
| Name | NM_000492.4:c.489+91A>G |
| Protein name | NP_000483.3:p.(?) |
| Genomic name (hg19) | chr7:g.117171259A>G UCSC gnomAD |
| #Exon/intron | intron 4 |
| Type in CFTR-NGS catalogue | - |
| Class in CFTR-France | not reported |
| WT sequence | AATTAGGTAGTGAGCTGGTACAAGT A AGGGATAAATGCTGAAATTAATTTA |
| Mutant sequence | AATTAGGTAGTGAGCTGGTACAAGT G AGGGATAAATGCTGAAATTAATTTA |
| MAF (GnomAD) | 2.04e-02 |
| Splicing prediction (SpliceAI) | AG: 0.00 (27) AL: 0.00 (-3) DG: 0.00 (-46) DL: 0.00 (-3) |
 Not found |  Not found | dbSNP rs56094102 |  Not found |  |
| Sanger (present/not present/not verified) |
Minigene (effect/no effect/not performed) |
| not verified | not performed |
No patient found in CFTR-France |
| TOTAL NUMBER OF INDIVIDUALS | 2 |
|---|---|
| CF | 1 |
| Suspicion of CF | 1 |
| ID | Phenotype | Laboratory | Experiment | Variant status | Variant filter | Quality score | Depth of coverage |
|---|---|---|---|---|---|---|---|
| m6426 | CF | Montpellier | 230414_varilh | heterozygous | PASS | 5912 | 534 |
| cad190204 | Suspicion of CF | Montpellier | 150419_Altieri | heterozygous | PASS | 2009 | 147 |
