catalog




CFTR-NGS variants catalogue


Variant hg19:chr7:117173632T/C


CFTR-NGS Variant details:
Name NM_000492.4:c.490-698T>C
Protein name NP_000483.3:p.(?)
Genomic name (hg19) chr7:g.117173632T>C    UCSC    gnomAD
#Exon/intron intron 4
Type in CFTR-NGS catalogue -
Class in CFTR-France not reported
WT sequence GGATTCACTTGAAACTAATATTAGA T AATTCCCAGTCAAAGTGATCTAATA
Mutant sequence GGATTCACTTGAAACTAATATTAGA C AATTCCCAGTCAAAGTGATCTAATA


Additional information:
MAF (GnomAD) 3.66e-03
Splicing prediction (SpliceAI) AG: 0.00 (43)
AL: 0.00 (10)
DG: 0.00 (50)
DL: 0.00 (-31)




External sources:

Not found
Not found		dbSNP
rs140852975
Not found

Variant validation:
Sanger
(present/not present/not verified)
 Minigene
(effect/no effect/not performed)
not verifiednot performed



No patient found in CFTR-France


1 individual (out of 136) carrying this variant is reported in CFTR-NGS catalogue:

TOTAL NUMBER OF INDIVIDUALS 1
Asymptomatic 1



Details of NGS patients:
ID Phenotype Laboratory Experiment Variant status Variant filter Quality score Depth of coverage
9005AsymptomaticMontpellier40216_varilhheterozygous PASS 1577 138





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