catalog




CFTR-NGS variants catalogue


Variant hg19:chr7:117173546T/C


CFTR-NGS Variant details:
Name NM_000492.4:c.490-784T>C
Protein name NP_000483.3:p.(?)
Genomic name (hg19) chr7:g.117173546T>C    UCSC    gnomAD
#Exon/intron intron 4
Type in CFTR-NGS catalogue -
Class in CFTR-France not reported
WT sequence GGGATTGTGTTTTCATAAATCTTAA T AATCCCTGAGGCATCAAGTACAGTG
Mutant sequence GGGATTGTGTTTTCATAAATCTTAA C AATCCCTGAGGCATCAAGTACAGTG


Additional information:
MAF (GnomAD) -
Splicing prediction (SpliceAI) AG: 0.00 (-39)
AL: 0.00 (11)
DG: 0.00 (17)
DL: 0.00 (-40)




External sources:

Not found
Not found		dbSNP
no rs
Not found

Variant validation:
Sanger
(present/not present/not verified)
 Minigene
(effect/no effect/not performed)
not verifiednot performed



No patient found in CFTR-France


1 individual (out of 136) carrying this variant is reported in CFTR-NGS catalogue:

TOTAL NUMBER OF INDIVIDUALS 1
CF 1



Details of NGS patients:
ID Phenotype Laboratory Experiment Variant status Variant filter Quality score Depth of coverage
18MU01177CFCochin150419_Altieriheterozygous PASS 1815 121





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