|
CFTR-NGS variants catalogue
Variant hg19:chr7:117122746G/A
| Name | NM_000492.4:c.53+2545G>A |
| Protein name | NP_000483.3:p.(=) |
| Genomic name (hg19) | chr7:g.117122746G>A UCSC gnomAD |
| #Exon/intron | intron 1 |
| Type in CFTR-NGS catalogue | - |
| Class in CFTR-France | not reported |
| WT sequence | TGATTTATAAATGGTCACCAACAGA G ATTGTGCTATTTAATTTGGGAAAAT |
| Mutant sequence | TGATTTATAAATGGTCACCAACAGA A ATTGTGCTATTTAATTTGGGAAAAT |
| MAF (GnomAD) | 1.40e-03 |
| Splicing prediction (SpliceAI) | AG: 0.00 (-1) AL: 0.00 (1) DG: 0.00 (-13) DL: 0.00 (1) |
 Not found |  Not found | dbSNP rs139941795 |  Not found |  |
| Sanger (present/not present/not verified) |
Minigene (effect/no effect/not performed) |
| not verified | not performed |
No patient found in CFTR-France |
| TOTAL NUMBER OF INDIVIDUALS | 1 |
|---|---|
| Suspicion of CF | 1 |
| ID | Phenotype | Laboratory | Experiment | Variant status | Variant filter | Quality score | Depth of coverage |
|---|---|---|---|---|---|---|---|
| cad200366 | Suspicion of CF | Montpellier | 151220_Altieri | heterozygous | PASS | 689 | 64 |
