CFTR-NGS variants catalogue
Name | NM_000492.4:c.54-1161_164+1603del |
Protein name | NP_000483.3:p.(Ser18_Glu54del) |
Genomic name (hg19) | chr7:g.117143146_117146020del UCSC |
#Exon/intron | intron 1 |
Legacy Name | CFTR-dele2 |
Type in CFTR-NGS catalogue | - |
Class in CFTR-France | disease-causing |
Subclass | CF-causing |
WT sequence | TTTGCCCCAGAACAGTGTCAAAATG TTTGCA [2863bp] CAAATG CCATGAGGTAGGGATACTTTGTTTT |
Mutant sequence | TTTGCCCCAGAACAGTGTCAAAATG ---------------------- CCATGAGGTAGGGATACTTTGTTTT |
MAF (GnomAD) | - |
Splicing prediction (SpliceAI) | - |
Not found | dbSNP no rs | Not found | Not found |
Sanger (present/not present/not verified) |
Minigene (effect/no effect/not performed) |
present | not performed |