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CFTR-NGS variants catalogue
Variant hg19:chr7:117139240C/T
| Name | NM_000492.4:c.54-5067C>T |
| Protein name | NP_000483.3:p.(?) |
| Genomic name (hg19) | chr7:g.117139240C>T UCSC gnomAD |
| #Exon/intron | intron 1 |
| Type in CFTR-NGS catalogue | - |
| Class in CFTR-France | not reported |
| WT sequence | ACTTGAAAAGATCTGATATCCATGA C CTTCATCTGAAGTTTTGGCAGATGA |
| Mutant sequence | ACTTGAAAAGATCTGATATCCATGA T CTTCATCTGAAGTTTTGGCAGATGA |
| MAF (GnomAD) | 3.81e-02 |
| Splicing prediction (SpliceAI) | AG: 0.00 (-15) AL: 0.00 (-16) DG: 0.00 (29) DL: 0.00 (-11) |
 Not found |  Not found | dbSNP rs34624661 |  Not found |  |
| Sanger (present/not present/not verified) |
Minigene (effect/no effect/not performed) |
| not verified | not performed |
No patient found in CFTR-France |
| TOTAL NUMBER OF INDIVIDUALS | 1 |
|---|---|
| CFTR-RD | 1
|
| ID | Phenotype | Laboratory | Experiment | Variant status | Variant filter | Quality score | Depth of coverage |
|---|---|---|---|---|---|---|---|
| 9 | CFTR-RD | Montpellier | 150517_varilh | heterozygous | PASS | 6498 | 580 |
